The Arabidopsis Gene Expression Database
The Arabidopsis Gene Expression Database (AGED) is a specialized bioinformatics resource designed to provide an extensive repository of gene expression data for Arabidopsis thaliana, one of the most widely studied model organisms in plant biology. This database compiles, organizes, and visualizes transcriptomic data from various experimental conditions, allowing researchers to explore gene activity in different tissues, developmental stages, and environmental contexts.
With the increasing availability of large-scale transcriptomic datasets, AGED serves as a crucial tool for functional genomics, gene discovery, and regulatory network analysis. It integrates data from multiple high-throughput technologies, including microarray, RNA sequencing (RNA-seq), and quantitative PCR (qPCR), offering a comprehensive view of gene expression dynamics.

- Gene Expression Profiles : Browse and compare expression levels of Arabidopsis genes across tissues, organs, and treatments.
- Interactive Visualization : Graphical tools for visualizing expression trends, heatmaps, and gene co-expression networks.
- Experimental Data Integration : Incorporates RNA-seq, microarray, and qPCR datasets from publicly available sources.
- Search and Query Tools : Find gene expression data using gene IDs, keywords, or functional categories.
- Comparative Analysis : Compare gene expression between different conditions, genotypes, or developmental stages.

Gene Expression and Protein Tools
View expression patterns as electronic fluorescent pictographs or heatmaps, explore promoters, identify protein-protein interactions and more.

Molecualr Markersand Mapping Tools
Perform Next Generation Mapping, or generate your own markers using our molecular marker tools.

Other Genomic Tools and Widgets
Remove duplicates, perform multi-dimensional Venn analyses, or generate random lists of identifiers.